BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C11LP1|AL426344
(792 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig213 911 0.0
>3x_Contig213
Length = 1583
Score = 911 bits (456), Expect = 0.0
Identities = 468/476 (98%)
Strand = Plus / Plus
Query: 1 aaacattaatatacagaagaaaataaagactaacgttataaatgatgaagtattagttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 aaacattaatatacagaagaaaataaagactaacgttataaatgatgaagtattagttga 1154
Query: 61 aatgatgggataaaccggttttaacatcctaaaaaaaaaaggcacttcttagaatatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 aatgatgggataaaccggttttaacatcctaaaaaaaaaaggcacttcttagaatatcat 1214
Query: 121 ttctttggtggattttaccggcacatatggttttgttgtatcaattgagaaaggacacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 ttctttggtggattttaccggcacatatggttttgttgtatcaattgagaaaggacacaa 1274
Query: 181 gatgtctgatgtatcttctattgataacgttaaatgamatttacaattacmagagcagga 240
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 1275 gatgtctgatgtatcttctattgataacgttaaatgaaatttacaattacaagagcagga 1334
Query: 241 tgaaagtgaatgtggcaataactggtatagatatcttgataaagccagccataaagggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1335 tgaaagtgaatgtggcaataactggtatagatatcttgataaagccagcaataaagggaa 1394
Query: 301 caaaaagaagtgaaacatgattgtsaatmamattagtacaattacactttcctgctggat 360
|||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 1395 caaaaagaagtgaaacatgattgtaaataaaattagtacaattacactttcctgctggat 1454
Query: 361 gtttgggtggcgttaccccttgamatttcaaatcttgtgacaagagggatgtggtcactt 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1455 gtttgggtggcgttaccccttgaaatttcaaatcttgtgacaagagggatgtggtcactt 1514
Query: 421 gggaacttatcgttagggaacccaataaacttggatgcmtactcctcgtcgatctt 476
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1515 gggaacttatcgttagggaacccaataaacttggatgcatactcctcgtcgatctt 1570
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6706
Number of Sequences: 1807
Number of extensions: 6706
Number of successful extensions: 129
Number of sequences better than 1.0e-20: 1
length of query: 792
length of database: 10,358,551
effective HSP length: 16
effective length of query: 776
effective length of database: 10,329,639
effective search space: 8015799864
effective search space used: 8015799864
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)